DNA
AckRS

Part:BBa_K1722003:Design

Designed by: Hao Wang   Group: iGEM15_SZU_China   (2015-08-27)


AckRS can produce a aminoacyl tRNA synthetase.


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    COMPATIBLE WITH RFC[12]
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal XhoI site found at 1261
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 450
  • 1000
    COMPATIBLE WITH RFC[1000]


Design Notes

The AckRS that we achieved from Shenzhen Second People's Hospital was carried by psi-Check2, which was Amp resistence. After sequencing, we found AckRS has two EcoR1 enzyme cutting site, which are the same as the site in the flank of pSB1C3. So we mutate one of the base pairs on each of the two sites. The plasmid with AckRS that we submitted is EcoR1 free.


Source

We achieved this part from Shenzhen Second People's Hospital, which is Shenzhen University First Hospital. They were doing reseach on unnatural amino acid orthogonal system and fortunately, they agree to provide us the gene.

References

[1] Hausmann C D, Ibba M. Aminoacyl- tRNA synthetase complexes: molecular multitasking revealed. FEMS Microbiol Rev, 2008, 32(4): 705 ~ 721

[2] Han JM, Kim J Y, Kim S. Molecular network and functional implications of macromolecular tRNA synthetase complex. Biochem Biophys Res Commun, 2003, 303(4): 985~ 993

[3] Veronika F, Milan V, Sabine S. Structural basis for the site-specific Incorporation of Lysine Derivatives into Proteins. Plos One, 2014, 9(4): 1~7